BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002F01SP1|AL424989
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig948 1343 0.0
>3x_Contig948
Length = 3578
Score = 1343 bits (668), Expect = 0.0
Identities = 803/854 (94%), Gaps = 5/854 (0%)
Strand = Plus / Plus
Query: 6 tttcatatagcyatgttcaattggcgtgtttgtttcttgaatcattcattgccatttcgg 65
||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1305 tttcatatagccatgatcaattggcgtgtttgtttcttgaatcattcaatgccatttcga 1364
Query: 66 tggttaattgggacgacgaaattttaagattacagaataggctgtggg-caaaggttaag 124
||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1365 tggaaaattggaacgacgaaattttaagattacagaataggctgtggggcaaaggttaag 1424
Query: 125 gataagtcaataagagattcaagatctgatgacattttatctattcacgataaagtgttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1425 gataagtcaataagagattcaagatctgatgacattttatctattcacgataaagtgttt 1484
Query: 185 ttgttagcagawacttgtwatcgccagattactcctgccatcgaatggrtgatcattacc 244
||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1485 ttgttagcagaaacttgtaatcgccagattactcctgccatcgaatggatgatcattacc 1544
Query: 245 cttgaagatatttatgccatcaataagawttctatgagtdacgattttkarggragctca 304
|||||||||||||||||||||||||||| |||||||||| |||||||| | || ||||||
Sbjct: 1545 cttgaagatatttatgccatcaataagaattctatgagtaacgattttaaaggaagctca 1604
Query: 305 actgctgctaatatwcctattctgactaagaactataactgcvataagagattttctgcc 364
|||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 1605 actgctgctaatatacctattctgactaagaactataactgcaataagaaattttctgcc 1664
Query: 365 aatgataacgacgtgcgatctacaatcccagtactttccattaacgcgtctgattttcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1665 aatgataacgacgtgcgatctacaatcccagtactttccattaacgcgtctgattttcaa 1724
Query: 425 acgaatacattgggcatcaatgagcgattgataaagggtatcacagcttgcctgaggggg 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1725 acgaatacattgggcatcaatgagcgattgataaagggtatcacagcttgcctgagggga 1784
Query: 485 aatrgaggtgggagggccgagtcttatgngagggtacaagttccagtactttacgagtta 544
||| ||||||| | |||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 1785 aatagaggtggaaaaaccgagtcttatgaaaggatacaagttccagtactttacgagtta 1844
Query: 545 atgatgcctgngctaccaaagaggaacctgngacgtctnttnckncattcttttgntntt 604
|||||||||| ||||||||||||||||||| |||||| || | |||||| | | ||
Sbjct: 1845 atgatgcctgagctaccaaagaggaacctgaaacgtctattacaacattctaaagatatt 1904
Query: 605 ttcttaagcaaattacaattgttggataacaacgaactaagcagttacttaacagaaggg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1905 ttcttaagcaaattacaattgttggataacaacgaactaagcagttacttaacagaaggg 1964
Query: 665 agtcaagacgtacaattcgagatcagttatcgatattgtgttcttttatcactctttatg 724
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 1965 agtcaagacgtacaattcgagatcagttatcgaaattgtgttc-tttatcactctttatg 2023
Query: 725 tcagtcttcgttcatcgctggrataaaacccgtagtgtcaagtaaagawgaggaagwaga 784
||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||
Sbjct: 2024 tcagtcttcgttcatcgctggaataaaacccgtagtgtcaagtaaagaagaggaaaaaga 2083
Query: 785 agtaaggtagatcacttgarcacatcaaatttagcctggag-ccttcgatgagctgccar 843
|| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 2084 ag-aaggtagatcacttgaccacatcaaatttagcctggagcccttcgatgagctgccag 2142
Query: 844 a-gtgtgtatcgaa 856
| ||||||||||||
Sbjct: 2143 aggtgtgtatcgaa 2156
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4161
Number of Sequences: 1807
Number of extensions: 4161
Number of successful extensions: 89
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)